STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBNO1Strawberry notch homolog 1. (1229 aa)    
Predicted Functional Partners:
MACO1
Macoilin 1.
      
 0.748
TTC26
Tetratricopeptide repeat domain 26.
      
 0.697
RAP1GDS1
Rap1 GTPase-GDP dissociation stimulator 1.
      
 0.621
CAB39
Calcium binding protein 39.
      
 0.611
SH3PXD2A
SH3 and PX domains 2A.
      
 0.611
OLA1
Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP.
      
 0.602
SF3A1
Splicing factor 3a subunit 1.
      
 0.602
FBXW11
F-box and WD repeat domain containing 11.
      
 0.586
ENSAPLP00000018903
Uncharacterized protein.
      
 0.586
TRIM37
Tripartite motif containing 37.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.