STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC22A23Solute carrier family 22 member 23. (639 aa)    
Predicted Functional Partners:
FUCA2
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.747
SLC22A18
Solute carrier family 22 member 18.
   
  
 0.697
PRPF4B
Pre-mRNA processing factor 4B.
      
 0.621
INTS9
Integrator complex subunit 9.
    
 0.520
INTS1
Integrator complex subunit 1.
    
 0.506
INTS11
Integrator complex subunit 11.
    
 0.500
HIVEP2
Human immunodeficiency virus type I enhancer binding protein 2.
    
 
 0.490
SNX9
Sorting nexin 9.
      
 0.477
INTS4
Integrator complex subunit 4.
    
 0.476
INTS13
Integrator complex subunit 13.
    
 0.470
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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