STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS4Bardet-Biedl syndrome 4. (505 aa)    
Predicted Functional Partners:
BBS2
Bardet-Biedl syndrome 2.
   
 0.998
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.996
BBS9
PHTB1_N domain-containing protein.
   
 0.978
ENSAPLP00000032116
PHTB1_C domain-containing protein.
   
 0.978
KLHL41
Kelch like family member 41.
    
 0.944
TTC8
Uncharacterized protein.
   
 0.928
ENSAPLP00000019065
TPR_REGION domain-containing protein.
   
 0.928
ENSAPLP00000026428
Uncharacterized protein.
   
 0.928
LZTFL1
Leucine zipper transcription factor like 1.
   
 0.921
KLHL40
Kelch like family member 40.
    
 0.901
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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