STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJM1Apical junction component 1 homolog. (989 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
      
 0.600
SURF4
Surfeit 4.
   
 
 0.532
ENSAPLP00000025018
Uncharacterized protein.
   
 
 0.486
COPB2
Coatomer protein complex subunit beta 2.
    
 
 0.471
COPE
Coatomer protein complex subunit epsilon.
   
 
 0.468
MAN1B1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
    
 
 0.449
TMED2
Transmembrane p24 trafficking protein 2.
   
 
 0.423
CLGN
Calmegin.
    
 
 0.411
CANX
Calnexin.
    
 
 0.411
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.