STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VCANVersican. (3546 aa)    
Predicted Functional Partners:
DCN
Decorin; May affect the rate of fibrils formation.
    
 0.785
ENSAPLP00000020586
Uncharacterized protein.
    
0.745
ASPN
Asporin.
    
 0.689
ACAN
Aggrecan.
    
0.686
TNN
Tenascin N.
    
 0.660
CD44
CD44 molecule (Indian blood group).
    
 
0.636
COL3A1
Uncharacterized protein.
    
 0.629
COL1A1
Collagen type I alpha 1 chain.
    
 0.629
NXT2
Nuclear transport factor 2 like export factor 2.
     
 0.608
PTPRZ1
Protein-tyrosine-phosphatase.
    
 0.590
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.