STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARIH1RBR-type E3 ubiquitin transferase. (554 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
    
 0.932
UBE2L3
Ubiquitin conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.909
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.882
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
  0.875
ENSAPLP00000023897
Uncharacterized protein.
    
 0.856
CUL1
Cullin 1; Belongs to the cullin family.
   
 0.855
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.792
SLC25A37
Solute carrier family 25 member 37; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.783
U3IK98_ANAPP
Uncharacterized protein.
 
    
 0.747
EIF4E2
Eukaryotic translation initiation factor 4E family member 2; Belongs to the eukaryotic initiation factor 4E family.
    
 0.739
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.