STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRMPLymphoid restricted membrane protein. (380 aa)    
Predicted Functional Partners:
RPS25
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
     
 0.658
ADAD1
Adenosine deaminase domain containing 1.
    
 
 0.634
LARP6
La ribonucleoprotein domain family member 6.
      
 0.632
RPL4
Ribosomal protein L4.
   
 0.553
ESRP2
Epithelial splicing regulatory protein 2.
      
 0.508
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
    
 0.472
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 0.472
ITPR1
Inositol 1,4,5-trisphosphate receptor type 1.
    
 0.472
APCDD1
APC down-regulated 1.
   
 0.466
SASS6
SAS-6 centriolar assembly protein.
    
 0.461
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.