STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP77Cilia and flagella associated protein 77. (180 aa)    
Predicted Functional Partners:
SPACA9
Sperm acrosome associated 9.
   
 
 0.616
C5orf49
Chromosome 5 open reading frame 49.
   
   0.557
EFHB
Uncharacterized protein.
   
   0.554
C9orf116
Chromosome 9 open reading frame 116.
   
   0.553
EFHC2
EF-hand domain containing 2.
   
   0.547
EFHC1
EF-hand domain containing 1.
   
   0.547
C1orf158
Chromosome 1 open reading frame 158.
   
   0.540
C11orf1
Chromosome 11 open reading frame 1.
   
   0.539
ENKUR
Enkurin, TRPC channel interacting protein.
   
   0.539
TEKT1
Tektin 1.
   
   0.537
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.