STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO2A1Solute carrier organic anion transporter family member. (714 aa)    
Predicted Functional Partners:
PUM3
Pumilio RNA binding family member 3.
      
 0.611
LRATD1
LRAT domain containing 1.
      
 0.586
U3IYL3_ANAPP
Uncharacterized protein.
      
 0.586
DUSP15
Tyrosine-protein phosphatase domain-containing protein.
      
 0.586
ZNF362
Zinc finger protein 362.
      
 0.586
TRAPPC13
Trafficking protein particle complex 13.
      
 0.542
RIPOR3
RIPOR family member 3.
      
 0.524
DPH6
Diphthami_syn_2 domain-containing protein.
      
 0.485
IKZF5
IKAROS family zinc finger 5.
      
 0.483
EFCAB5
EF-hand calcium binding domain 5.
      
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.