STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFXANKANK_REP_REGION domain-containing protein. (395 aa)    
Predicted Functional Partners:
RFX5
Regulatory factor X5.
    
 
 0.984
RFXAP
Regulatory factor X associated protein.
    
 
 0.974
ENSAPLP00000025719
RFX-type winged-helix domain-containing protein.
    
 
 0.855
NLRC5
NLR family CARD domain containing 5.
   
 0.755
CIITA
NACHT domain-containing protein.
   
 0.681
NR2C2AP
Nuclear receptor 2C2 associated protein.
    
 0.658
SLC35E1
Solute carrier family 35 member E1.
    
 
 0.635
SUGP1
SURP and G-patch domain containing 1.
   
  
 0.620
SLC25A42
Solute carrier family 25 member 42; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
 
 0.614
NFYC
Nuclear transcription factor Y subunit gamma.
    
 
 0.613
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.