STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC9ATP binding cassette subfamily C member 9. (1535 aa)    
Predicted Functional Partners:
KCNJ11
Potassium voltage-gated channel subfamily J member 11.
 
 
 0.994
KCNJ8
Potassium voltage-gated channel subfamily J member 8.
 
 
 0.974
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.693
TXNDC12
Thioredoxin domain containing 12.
   
 0.640
ITPR2
Inositol 1,4,5-trisphosphate receptor type 2.
    
 
 0.635
CASC1
Cancer susceptibility 1.
      
 0.633
KNDC1
Kinase non-catalytic C-lobe domain containing 1.
      
 0.611
WNK1
WNK lysine deficient protein kinase 1.
      
 0.590
RAPGEF3
Rap guanine nucleotide exchange factor 3.
    
 0.585
CACNA1C
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
      
 0.551
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.