STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIGA1Mitoguardin 1. (601 aa)    
Predicted Functional Partners:
MIGA2
Mitoguardin 2.
    
 
0.910
NEXN
Nexilin F-actin binding protein.
 
   
 0.865
ZZZ3
Uncharacterized protein.
      
 0.749
GIPC2
GIPC PDZ domain containing family member 2.
      
 0.748
UHMK1
U2AF homology motif kinase 1.
      
 0.747
ADGRL4
Adhesion G protein-coupled receptor L4; Belongs to the G-protein coupled receptor 2 family.
      
 0.684
AK5
Adenylate kinase 5.
      
 0.627
USP33
Ubiquitin carboxyl-terminal hydrolase.
      
 0.623
FUBP1
Far upstream element binding protein 1.
      
 0.611
SGPL1
Sphingosine-1-phosphate lyase 1.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.