STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCF3Uncharacterized protein. (104 aa)    
Predicted Functional Partners:
GCN1
GCN1 activator of EIF2AK4.
   
 
 0.975
ABCF2
Uncharacterized protein.
 
 
 
 0.941
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.869
RPL35
Ribosomal protein L35.
   
 
 0.851
RPL11
Ribosomal protein L11.
   
 
 0.836
RPL26
Ribosomal protein L26.
   
 
 0.832
U3J0U8_ANAPP
Uncharacterized protein.
   
 
 0.831
MRPL21
Mitochondrial ribosomal protein L21.
  
   0.829
RPL5
Ribosomal_L18_c domain-containing protein.
  
 
 0.828
MRPL13
Mitochondrial ribosomal protein L13.
  
   0.826
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.