STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000016707Uncharacterized protein. (218 aa)    
Predicted Functional Partners:
KLHL28
BTB domain-containing protein.
 
      0.899
KLHL20
Kelch like family member 20.
 
  
  0.830
KIRREL1
Kirre like nephrin family adhesion molecule 1.
    
 
 0.631
BBS4
Bardet-Biedl syndrome 4.
    
 0.572
BBS7
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
   
 0.545
KLHL35
BTB domain-containing protein.
 
 
   0.527
BBS9
PHTB1_N domain-containing protein.
    
 0.511
ENSAPLP00000032116
PHTB1_C domain-containing protein.
    
 0.511
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.502
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.502
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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