STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TULP3Tubby-like protein; Belongs to the TUB family. (471 aa)    
Predicted Functional Partners:
GPR161
G protein-coupled receptor 161; Belongs to the G-protein coupled receptor 1 family.
     
 0.843
IFT122
Intraflagellar transport 122.
    
 0.753
IFT140
Intraflagellar transport 140.
    
 0.750
U3I0P0_ANAPP
G_PROTEIN_RECEP_F1_2 domain-containing protein.
     
 0.714
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.678
SSTR3
Somatostatin receptor 3; Belongs to the G-protein coupled receptor 1 family.
     
 0.631
WDR19
WD repeat domain 19.
    
 0.617
ARL13B
ADP ribosylation factor like GTPase 13B.
   
  
 0.613
RAB23
RAB23, member RAS oncogene family.
      
 0.611
IFT172
Intraflagellar transport 172.
      
 0.586
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.