STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM50BTransmembrane protein 50B. (189 aa)    
Predicted Functional Partners:
LEPROTL1
Leptin receptor overlapping transcript like 1.
   
 
 0.749
LEPROT
Leptin receptor overlapping transcript.
   
 
 0.749
PIGV
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis.
      
 0.743
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.714
SERGEF
Secretion regulating guanine nucleotide exchange factor.
      
 0.693
EMC3
ER membrane protein complex subunit 3; Belongs to the EMC3 family.
      
 0.674
SLC29A3
Solute carrier family 29 member 3.
   
  
 0.626
DNAJC28
DnaJ heat shock protein family (Hsp40) member C28.
      
 0.624
TRAP1
TNF receptor associated protein 1.
   
  
 0.607
GLRB
Glycine receptor beta; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.604
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.