STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPTFBromodomain PHD finger transcription factor. (3050 aa)    
Predicted Functional Partners:
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.874
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.836
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.836
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 
 0.812
NIPBL
Nipped-B protein.
   
    0.737
RSF1
Remodeling and spacing factor 1.
   
 
 0.703
HELLS
Helicase, lymphoid specific.
   
 
 0.689
CHD1L
Chromodomain helicase DNA binding protein 1 like.
   
 
 0.689
WDR73
Uncharacterized protein.
    
 
 0.684
TAF3
TATA-box binding protein associated factor 3.
   
  
0.666
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.