STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF213Ring finger protein 213. (4283 aa)    
Predicted Functional Partners:
ENSAPLP00000027937
Uncharacterized protein.
 
 
  0.923
CMTR1
Cap methyltransferase 1.
   
  
 0.684
WDR55
WD repeat-containing protein 55; Nucleolar protein that acts as a modulator of rRNA synthesis. Plays a central role during organogenesis. Belongs to the WD repeat WDR55 family.
      
 0.621
U3J3V6_ANAPP
Uncharacterized protein.
    
 0.614
LYRM2
LYR motif containing 2; Belongs to the complex I LYR family.
      
 0.611
THOC3
THO complex 3.
      
 0.611
USP18
USP domain-containing protein; Belongs to the peptidase C19 family.
   
 0.609
C3orf38
Chromosome 3 open reading frame 38.
      
 0.609
PGAP2
Post-GPI attachment to proteins 2.
    
 
 0.607
ENSAPLP00000021527
zf-3CxxC domain-containing protein.
   
  
 0.577
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.