STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SALL3Spalt like transcription factor 3. (1256 aa)    
Predicted Functional Partners:
U3J2G2_ANAPP
Homeobox domain-containing protein.
   
 0.623
U3I3F9_ANAPP
POU domain protein.
   
 0.600
RBBP4
RB binding protein 4, chromatin remodeling factor.
    
 0.555
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
 0.555
WDR73
Uncharacterized protein.
    
 0.547
PARD6G
Par-6 family cell polarity regulator gamma.
      
 0.545
ARID4B
AT-rich interaction domain 4B.
      
 0.518
ARID4A
AT-rich interaction domain 4A.
      
 0.518
GATAD2A
GATA zinc finger domain containing 2A.
    
 0.487
ENSAPLP00000017587
Uncharacterized protein.
    
 0.487
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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