STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRAUncharacterized protein. (253 aa)    
Predicted Functional Partners:
ENSAPLP00000017602
Uncharacterized protein.
 
      0.899
PTPN13
KIND domain-containing protein.
 
  
 
 0.864
PTPRT-2
MAM domain-containing protein.
 
  
   0.824
GRB2
Growth factor receptor bound protein 2.
   
 0.751
EPB41L1
Erythrocyte membrane protein band 4.1 like 1.
 
    
 0.616
ZNF711
Zinc finger protein 711.
     
 0.612
U3ILB4_ANAPP
Uncharacterized protein.
      
 0.592
ENSAPLP00000018903
Uncharacterized protein.
    
 0.587
LNX2
Ligand of numb-protein X 2.
     
 0.547
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
    
 0.537
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.