STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPREB3V-set pre-B cell surrogate light chain 3. (110 aa)    
Predicted Functional Partners:
CD79B
CD79b molecule.
   
 0.852
CACNA1H
Calcium voltage-gated channel subunit alpha1 H.
     
 0.684
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.611
GRM3
Glutamate metabotropic receptor 3.
     
 0.546
VAV2
Vav guanine nucleotide exchange factor 2.
     
 0.523
BLK
Tyrosine-protein kinase.
   
 0.485
CHRNA7
Uncharacterized protein.
      
 0.473
POU2AF1
ANK_REP_REGION domain-containing protein.
   
  
 0.472
F2RL2
Coagulation factor II thrombin receptor like 2.
    
 0.461
SWAP70
Switching B cell complex subunit SWAP70.
     
 0.452
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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