STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPOPyridoxamine 5'-phosphate oxidase. (165 aa)    
Predicted Functional Partners:
PDXK
Pyridoxal kinase.
    
 0.941
YJEFN3
YjeF N-terminal domain-containing protein.
    
 0.910
PSAT1
Phosphoserine aminotransferase.
  
  
 0.634
SHMT2
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.627
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
  
 0.627
IAH1
Isoamyl acetate hydrolyzing esterase 1 (putative).
     
 0.621
BSDC1
BSD domain containing 1.
      
 0.621
ENSAPLP00000020610
QRPTase_C domain-containing protein.
     
 0.612
FNDC4
Fibronectin type III domain containing 4.
      
 0.611
ARL2BP
ADP ribosylation factor like GTPase 2 binding protein.
      
 0.611
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.