STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM149B1Family with sequence similarity 149 member B1. (630 aa)    
Predicted Functional Partners:
TBC1D32
TBC1 domain family member 32.
    
 
 0.591
GM2A
ML domain-containing protein.
    
 0.565
DNAJC9
DnaJ heat shock protein family (Hsp40) member C9.
      
 0.548
CFAP20
Cilia and flagella associated protein 20.
    
 
 0.521
U3IJD4_ANAPP
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.440
U3IKF9_ANAPP
Chitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.440
U3IKG1_ANAPP
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
    
 0.440
CTBS
Chitobiase; Belongs to the glycosyl hydrolase 18 family.
    
 0.440
AMDHD2
Uncharacterized protein.
    
 0.436
HAL
Histidine ammonia-lyase; Belongs to the PAL/histidase family.
   
    0.402
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.