STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HYLS1HYLS1 centriolar and ciliogenesis associated. (315 aa)    
Predicted Functional Partners:
CEP44
Centrosomal protein 44.
      
 0.624
SPICE1
Uncharacterized protein.
      
 0.611
RTTN
RTTN_N domain-containing protein.
      
 0.595
ENSAPLP00000024733
Uncharacterized protein.
      
 0.595
FBF1
Fas binding factor 1.
      
 0.586
B9D1
B9 domain containing 1.
      
 0.521
CEP120
Centrosomal protein 120.
    
 
 0.493
PKNOX2
PBX/knotted 1 homeobox 2.
      
 0.491
LRRC45
Leucine rich repeat containing 45.
      
 0.475
XKR8
XK-related protein.
      
 0.444
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.