STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CARD19Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
EPN3
Epsin 3.
      
 0.749
CCDC85A
Coiled-coil domain containing 85A.
      
 0.748
ITCH
E3 ubiquitin-protein ligase.
     
 0.637
NUP43
Nucleoporin 43.
      
 0.637
BRAT1
BRCA1 associated ATM activator 1.
      
 0.634
SLC25A30
Solute carrier family 25 member 30; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.611
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
      
 0.610
KPNA7
Karyopherin subunit alpha 7.
      
 0.610
CYGB
Cytoglobin; Belongs to the globin family.
      
 0.610
KPNA7-2
IBB domain-containing protein.
      
 0.610
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.