STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D30TBC1 domain family member 30. (886 aa)    
Predicted Functional Partners:
NRIP3
Nuclear receptor interacting protein 3.
    
 
 0.715
RNF182
Ring finger protein 182.
      
 0.612
ARHGAP12
Rho GTPase activating protein 12.
      
 0.611
LHFPL2
LHFPL tetraspan subfamily member 2.
      
 0.611
MCC
MCC regulator of WNT signaling pathway.
      
 0.609
LAMP5
Lysosomal associated membrane protein family member 5.
      
 0.602
SYTL2
Synaptotagmin like 2.
    
 
 0.595
SCRG1
Stimulator of chondrogenesis 1.
   
  
 0.590
SLC39A6
Solute carrier family 39 member 6.
      
 0.587
KCNH5
Potassium voltage-gated channel subfamily H member 5.
      
 0.587
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.