STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNPOSynaptopodin. (1131 aa)    
Predicted Functional Partners:
SUOX
Sulfite oxidase.
      
 0.602
NPHS2
NPHS2 stomatin family member, podocin.
     
 0.596
PFN4
Profilin; Belongs to the profilin family.
    
 0.587
PFN2
Profilin; Belongs to the profilin family.
    
 0.587
TJP1
Tight junction protein 1; Belongs to the MAGUK family.
     
 0.565
PODXL
Podocalyxin like.
    
 0.531
MAGI1
Membrane associated guanylate kinase, WW and PDZ domain containing 1.
    
 
 0.528
GAS7
Growth arrest specific 7.
    
 0.471
WT1
WT1 transcription factor.
    
 
 0.463
ANLN
Anillin actin binding protein.
   
 0.462
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.