STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MDGA2MAM domain containing glycosylphosphatidylinositol anchor 2. (1006 aa)    
Predicted Functional Partners:
NLGN1
Neuroligin 1.
   
 0.804
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
   
 0.662
NLGN4X
COesterase domain-containing protein.
   
 0.648
NLGN3
Neuroligin 3.
   
 0.635
GATAD1
GATA zinc finger domain containing 1.
      
 0.611
RBM19
RNA binding motif protein 19.
      
 0.532
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
 
 0.489
RBM45
RNA binding motif protein 45.
      
 0.477
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
      
 0.473
FGD5
FYVE, RhoGEF and PH domain containing 5.
      
 0.441
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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