STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNRKSNF related kinase. (765 aa)    
Predicted Functional Partners:
NSD2
Nuclear receptor binding SET domain protein 2.
      
 0.632
FNDC3B
Fibronectin type III domain containing 3B.
      
 0.632
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
   
 
 0.608
FKBP5
Peptidylprolyl isomerase.
      
 0.450
NFIA
Nuclear factor 1; Recognizes and binds the palindromic sequence 5'- TTGGCNNNNNGCCAA-3' present in viral and cellular promoters and in the origin of replication of adenovirus type 2. These proteins are individually capable of activating transcription and replication.
      
 0.450
ZBTB16
Zinc finger and BTB domain containing 16.
      
 0.450
TEAD1
TEA domain transcription factor 1.
      
 0.443
ACSS3
Acyl-CoA synthetase short chain family member 3.
      
 0.400
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.