STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GFOD1Glucose-fructose oxidoreductase domain containing 1. (390 aa)    
Predicted Functional Partners:
ARHGAP42
Rho GTPase activating protein 42.
      
 0.943
TGDS
TDP-glucose 4,6-dehydratase.
  
 
 0.652
KARS1
Lysine--tRNA ligase.
  
    0.594
SORD
Sorbitol dehydrogenase.
  
 
 0.575
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
 
 0.564
U3ID53_ANAPP
SGL domain-containing protein.
  
 
 0.563
RGN
Regucalcin.
  
 
 0.563
GALK2
Galactokinase 2.
  
 
 0.559
GALK1
Galactokinase 1.
  
 
 0.559
U3IQ12_ANAPP
CTP_transf_like domain-containing protein.
   
 
 0.473
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.