STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTNNAL1Catenin alpha like 1. (763 aa)    
Predicted Functional Partners:
TLN2
Talin 2.
   
 0.593
TLN1
Talin 1.
   
 0.593
TLNRD1
Talin rod domain containing 1.
   
 0.593
ARHGEF7
Rho guanine nucleotide exchange factor 7.
      
 0.558
FGD5
FYVE, RhoGEF and PH domain containing 5.
      
 0.539
TMEM245
Transmembrane protein 245.
 
    
 0.519
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.495
ACER2
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.485
CTNNB1
Catenin beta 1.
   
 0.481
AKAP13
A-kinase anchoring protein 13.
    
 
 0.463
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.