STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL2Synaptotagmin like 2. (967 aa)    
Predicted Functional Partners:
PHACTR3
Phosphatase and actin regulator.
     
 0.655
SH3D19
SH3 domain containing 19.
   
 0.648
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.627
TRIM45
Tripartite motif containing 45.
    
 0.627
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.627
SLC39A6
Solute carrier family 39 member 6.
      
 0.610
TBC1D30
TBC1 domain family member 30.
    
 
 0.595
LHFPL2
LHFPL tetraspan subfamily member 2.
   
 
 0.590
TMA16
Translation machinery associated 16 homolog.
      
 0.586
DHX37
DEAH-box helicase 37.
    
 0.573
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.