STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS18ADAM metallopeptidase with thrombospondin type 1 motif 18. (1229 aa)    
Predicted Functional Partners:
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
      
 0.612
EXO1
Exonuclease 1.
   
  
 0.612
ASPN
Asporin.
      
 0.610
QPCT
Glutaminyl-peptide cyclotransferase.
      
 0.610
SALL4
Spalt like transcription factor 4.
   
  
 0.592
HIVEP3
Human immunodeficiency virus type I enhancer binding protein 3.
      
 0.589
USH1C
USH1 protein network component harmonin.
      
 0.580
IRX3
Iroquois homeobox 3.
      
 0.569
TMEM208
Transmembrane protein 208.
      
 0.555
B3GLCT
Beta 3-glucosyltransferase.
    
 0.521
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.