STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC14Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.629
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.618
ALG12
Mannosyltransferase.
   
  
 0.593
YDJC
YdjC chitooligosaccharide deacetylase homolog.
  
 
 0.537
PIK3IP1
Phosphoinositide-3-kinase interacting protein 1.
      
 0.495
RPS27A
Ubiquitin-like domain-containing protein.
    
 0.462
RTN4IP1
Reticulon 4 interacting protein 1.
      
 0.434
PREPL
Prolyl endopeptidase like.
      
 0.433
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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