STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFOX2RNA binding fox-1 homolog 2. (490 aa)    
Predicted Functional Partners:
RBM24
RNA binding motif protein 24.
  
 
 0.826
QKI
QKI, KH domain containing RNA binding.
   
 
 0.730
RBPMS
RNA binding protein, mRNA processing factor.
   
 
 0.671
MBNL1
Muscleblind like splicing regulator 1.
    
 
 0.614
TMEM184B
Transmembrane protein 184B.
      
 0.611
CELF2
CUGBP Elav-like family member 2.
   
 
 0.611
MBNL2
Muscleblind like splicing regulator 2.
    
 
 0.601
PTBP2
Polypyrimidine tract binding protein 2.
    
 
 0.581
RBM38
Uncharacterized protein.
   
 
 0.576
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
  
 
 0.560
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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