STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARA5Scavenger receptor class A member 5. (541 aa)    
Predicted Functional Partners:
DUOX2
Dual oxidase 2.
      
 0.716
DUSP11
Dual specificity phosphatase 11.
      
 0.635
DUSP11-2
TYR_PHOSPHATASE_2 domain-containing protein.
      
 0.635
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.524
CALR
Calreticulin.
   
 0.505
ENSAPLP00000028788
Uncharacterized protein.
   
 
 0.477
APOB
Apolipoprotein B.
     
 0.474
HSP90B1
Heat shock protein 90 beta family member 1.
   
 0.430
C1S
Complement C1s; Belongs to the peptidase S1 family.
    
 0.424
CALR3
Calreticulin.
   
 0.411
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.