STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TACC1Transforming acidic coiled-coil containing protein 1. (384 aa)    
Predicted Functional Partners:
TACC2
Transforming acidic coiled-coil containing protein 2.
    
 
0.569
CKAP5
Cytoskeleton associated protein 5.
    
 
 0.549
ENSAPLP00000020099
TOG domain-containing protein.
    
 
 0.549
CCDC125
Coiled-coil domain containing 125.
      
 0.487
CEP120
Centrosomal protein 120.
    
 0.478
TACC3
Transforming acidic coiled-coil containing protein 3.
    
 
0.455
POLR2B
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.452
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 
 0.429
FAM110A
Family with sequence similarity 110 member A.
      
 0.424
RASL11B
RAS like family 11 member B.
    
 0.414
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.