TRUB1 protein (Anas platyrhynchos) - STRING interaction network

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Score

TRUB1

TruB pseudouridine synthase family member 1. (324 aa)

Predicted Functional Partners:

GAR1

0.968

NOP10

0.961

SHQ1

0.954

NOP58

0.952

NAF1

0.875

SNU13

0.826

RPP38

0.826

TERT

0.821

PUS1

0.807

NOLC1

0.784

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GAR1	NAF1	ENSAPLP00000010653	ENSAPLP00000002676	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nuclear assembly factor 1 ribonucleoprotein.	0.797
GAR1	NOLC1	ENSAPLP00000010653	ENSAPLP00000011571	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nucleolar and coiled-body phosphoprotein 1.	0.665
GAR1	NOP10	ENSAPLP00000010653	ENSAPLP00000029846	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP10 ribonucleoprotein.	0.995
GAR1	NOP58	ENSAPLP00000010653	ENSAPLP00000008230	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	NOP58 ribonucleoprotein.	0.951
GAR1	RPP38	ENSAPLP00000010653	ENSAPLP00000001477	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonuclease P/MRP subunit p38.	0.925
GAR1	SHQ1	ENSAPLP00000010653	ENSAPLP00000032255	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.912
GAR1	SNU13	ENSAPLP00000010653	ENSAPLP00000000434	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.944
GAR1	TERT	ENSAPLP00000010653	ENSAPLP00000017788	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.965
GAR1	TRUB1	ENSAPLP00000010653	ENSAPLP00000018991	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	TruB pseudouridine synthase family member 1.	0.968
NAF1	GAR1	ENSAPLP00000002676	ENSAPLP00000010653	Nuclear assembly factor 1 ribonucleoprotein.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.797
NAF1	NOLC1	ENSAPLP00000002676	ENSAPLP00000011571	Nuclear assembly factor 1 ribonucleoprotein.	Nucleolar and coiled-body phosphoprotein 1.	0.439
NAF1	NOP10	ENSAPLP00000002676	ENSAPLP00000029846	Nuclear assembly factor 1 ribonucleoprotein.	NOP10 ribonucleoprotein.	0.946
NAF1	NOP58	ENSAPLP00000002676	ENSAPLP00000008230	Nuclear assembly factor 1 ribonucleoprotein.	NOP58 ribonucleoprotein.	0.520
NAF1	RPP38	ENSAPLP00000002676	ENSAPLP00000001477	Nuclear assembly factor 1 ribonucleoprotein.	Ribonuclease P/MRP subunit p38.	0.726
NAF1	SHQ1	ENSAPLP00000002676	ENSAPLP00000032255	Nuclear assembly factor 1 ribonucleoprotein.	SHQ1, H/ACA ribonucleoprotein assembly factor.	0.720
NAF1	SNU13	ENSAPLP00000002676	ENSAPLP00000000434	Nuclear assembly factor 1 ribonucleoprotein.	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.	0.730
NAF1	TERT	ENSAPLP00000002676	ENSAPLP00000017788	Nuclear assembly factor 1 ribonucleoprotein.	Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.	0.451
NAF1	TRUB1	ENSAPLP00000002676	ENSAPLP00000018991	Nuclear assembly factor 1 ribonucleoprotein.	TruB pseudouridine synthase family member 1.	0.875
NOLC1	GAR1	ENSAPLP00000011571	ENSAPLP00000010653	Nucleolar and coiled-body phosphoprotein 1.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.665
NOLC1	NAF1	ENSAPLP00000011571	ENSAPLP00000002676	Nucleolar and coiled-body phosphoprotein 1.	Nuclear assembly factor 1 ribonucleoprotein.	0.439