STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGEF39Rho guanine nucleotide exchange factor 39. (437 aa)    
Predicted Functional Partners:
SDCBP2
Syndecan binding protein 2.
      
 0.748
HAUS6
HAUS6_N domain-containing protein.
      
 0.635
MAST4
Microtubule associated serine/threonine kinase family member 4.
   
  
 0.626
MPP3
Membrane palmitoylated protein 3; Belongs to the MAGUK family.
      
 0.611
FRMD3
FERM domain containing 3.
      
 0.611
ABLIM3
Actin binding LIM protein family member 3.
      
 0.610
ABLIM2
Actin binding LIM protein family member 2.
      
 0.602
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4; Belongs to the glycosyltransferase 29 family.
      
 0.586
CBFA2T3
TAFH domain-containing protein.
      
 0.586
ARHGEF9
Cdc42 guanine nucleotide exchange factor 9.
    
 0.559
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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