STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAP3ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3. (1743 aa)    
Predicted Functional Partners:
TMEM200C
Transmembrane protein 200C.
      
 0.700
HS6ST3
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
      
 0.632
PRR16
Proline rich 16.
      
 0.612
TMEM154
Transmembrane protein 154.
      
 0.555
ENSAPLP00000030402
UDENN domain-containing protein.
      
 0.551
ENSAPLP00000026687
Uncharacterized protein.
      
 0.542
RHOV
Ras homolog family member V.
   
 0.527
RIPOR2
PL48 domain-containing protein.
      
 0.479
B3GNT7
Hexosyltransferase.
      
 0.477
TMEFF2
Transmembrane protein with EGF like and two follistatin like domains 2.
      
 0.453
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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