ENSAPLP00000019251 protein (Anas platyrhynchos)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSAPLP00000019251

annotation not available (129 aa)

Predicted Functional Partners:

MYSM1

0.961

ENSAPLP00000028245

0.893

ENSAPLP00000031941

0.887

H2BE1

0.854

ENSAPLP00000029576

0.851

ENSAPLP00000026997

0.808

U3IUD0_ANAPP

0.721

ENSAPLP00000021740

0.721

ENSAPLP00000025536

0.685

RPS27A

0.672

Your Current Organism:

Anas platyrhynchos

NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPLP00000019251	ENSAPLP00000021740	ENSAPLP00000019251	ENSAPLP00000021740	annotation not available	TPR_REGION domain-containing protein.	0.721
ENSAPLP00000019251	ENSAPLP00000025536	ENSAPLP00000019251	ENSAPLP00000025536	annotation not available	Ubiquitin-like domain-containing protein.	0.685
ENSAPLP00000019251	ENSAPLP00000026997	ENSAPLP00000019251	ENSAPLP00000026997	annotation not available	Uncharacterized protein; Belongs to the histone H2B family.	0.808
ENSAPLP00000019251	ENSAPLP00000028245	ENSAPLP00000019251	ENSAPLP00000028245	annotation not available	Uncharacterized protein.	0.893
ENSAPLP00000019251	ENSAPLP00000029576	ENSAPLP00000019251	ENSAPLP00000029576	annotation not available	Histone H2B; Belongs to the histone H2B family.	0.851
ENSAPLP00000019251	ENSAPLP00000031941	ENSAPLP00000019251	ENSAPLP00000031941	annotation not available	Histone H2B; Belongs to the histone H2B family.	0.887
ENSAPLP00000019251	H2BE1	ENSAPLP00000019251	ENSAPLP00000009306	annotation not available	Histone H2B; Belongs to the histone H2B family.	0.854
ENSAPLP00000019251	MYSM1	ENSAPLP00000019251	ENSAPLP00000005702	annotation not available	Myb like, SWIRM and MPN domains 1.	0.961
ENSAPLP00000019251	RPS27A	ENSAPLP00000019251	ENSAPLP00000004982	annotation not available	Ubiquitin-like domain-containing protein.	0.672
ENSAPLP00000019251	U3IUD0_ANAPP	ENSAPLP00000019251	ENSAPLP00000010853	annotation not available	JmjC domain-containing protein.	0.721
ENSAPLP00000021740	ENSAPLP00000019251	ENSAPLP00000021740	ENSAPLP00000019251	TPR_REGION domain-containing protein.	annotation not available	0.721
ENSAPLP00000021740	ENSAPLP00000025536	ENSAPLP00000021740	ENSAPLP00000025536	TPR_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.681
ENSAPLP00000021740	ENSAPLP00000026997	ENSAPLP00000021740	ENSAPLP00000026997	TPR_REGION domain-containing protein.	Uncharacterized protein; Belongs to the histone H2B family.	0.795
ENSAPLP00000021740	ENSAPLP00000028245	ENSAPLP00000021740	ENSAPLP00000028245	TPR_REGION domain-containing protein.	Uncharacterized protein.	0.934
ENSAPLP00000021740	ENSAPLP00000029576	ENSAPLP00000021740	ENSAPLP00000029576	TPR_REGION domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.795
ENSAPLP00000021740	ENSAPLP00000031941	ENSAPLP00000021740	ENSAPLP00000031941	TPR_REGION domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.795
ENSAPLP00000021740	H2BE1	ENSAPLP00000021740	ENSAPLP00000009306	TPR_REGION domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.795
ENSAPLP00000021740	RPS27A	ENSAPLP00000021740	ENSAPLP00000004982	TPR_REGION domain-containing protein.	Ubiquitin-like domain-containing protein.	0.593
ENSAPLP00000021740	U3IUD0_ANAPP	ENSAPLP00000021740	ENSAPLP00000010853	TPR_REGION domain-containing protein.	JmjC domain-containing protein.	0.928
ENSAPLP00000025536	ENSAPLP00000019251	ENSAPLP00000025536	ENSAPLP00000019251	Ubiquitin-like domain-containing protein.	annotation not available	0.685