STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPGAT1Lysophosphatidylglycerol acyltransferase 1. (370 aa)    
Predicted Functional Partners:
LPCAT2
Lysophosphatidylcholine acyltransferase 2.
     
 0.936
CRLS1
Cardiolipin synthase 1.
  
 0.927
LCLAT1
Lysocardiolipin acyltransferase 1.
     
0.911
GPAM
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.626
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
      
 0.602
ASAH1
N-acylsphingosine amidohydrolase 1; Belongs to the acid ceramidase family.
     
 0.588
KCNS3
Potassium voltage-gated channel modifier subfamily S member 3; Belongs to the potassium channel family.
      
 0.586
AGPAT1
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
     
 0.549
CHPT1
Choline phosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
      
 0.495
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
      
 0.483
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.