STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD2Programmed cell death 2. (243 aa)    
Predicted Functional Partners:
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.644
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
   
  
 0.521
GNPAT
Dihydroxyacetone phosphate acyltransferase.
 
      0.500
LTV1
Uncharacterized protein.
   
  
 0.486
PNO1
Partner of NOB1 homolog.
   
  
 0.467
FAM120B
Family with sequence similarity 120B.
      
 0.461
WDPCP
WD repeat containing planar cell polarity effector.
    
 
 0.451
MRPS5
Mitochondrial ribosomal protein S5.
    
 
 0.442
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.