STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF11Ring finger protein 11. (154 aa)    
Predicted Functional Partners:
U3J5I9_ANAPP
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.824
TAX1BP1
Tax1 binding protein 1.
   
 
 0.818
ITCH
E3 ubiquitin-protein ligase.
    
 0.813
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.748
TNFAIP3
TNF alpha induced protein 3.
   
 
 0.715
U3J3E3_ANAPP
Uncharacterized protein.
    
 
 0.596
ENSAPLP00000023997
Uncharacterized protein.
    
 
 0.596
ENSAPLP00000025536
Ubiquitin-like domain-containing protein.
    
 0.585
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
   
 0.569
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.522
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.