STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB30RAB30, member RAS oncogene family. (203 aa)    
Predicted Functional Partners:
COG4
Cog4 domain-containing protein.
    
 0.779
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
     
 0.720
CHM
Uncharacterized protein.
    
 0.697
COG3
Component of oligomeric golgi complex 3.
    
 0.648
COG1
Component of oligomeric golgi complex 1.
     
 0.644
COG2
Component of oligomeric golgi complex 2.
     
 0.634
RAB36
RAB36, member RAS oncogene family.
  
  
 
0.632
COG5
Component of oligomeric golgi complex 5.
     
 0.628
COG7
Component of oligomeric golgi complex 7.
     
 0.616
NAA50
N(alpha)-acetyltransferase 50, NatE catalytic subunit.
      
 0.609
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.