STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDE4CPhosphodiesterase. (480 aa)    
Predicted Functional Partners:
ENSAPLP00000018108
Uncharacterized protein.
 
      0.664
PRKACB
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 0.572
PDE6G
Phosphodiesterase 6G.
    
 0.534
PRKX
Uncharacterized protein.
   
 0.516
ENSAPLP00000026116
Uncharacterized protein.
 
   
  0.515
TM4SF1
Transmembrane 4 L six family member 1.
      
 0.478
THAP1
THAP domain containing 1.
   
 0.400
ENSAPLP00000022655
Uncharacterized protein.
   
 0.400
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.