STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD5Programmed cell death 5. (127 aa)    
Predicted Functional Partners:
RPS11
Ribosomal protein S11.
   
    0.846
RPS19
Uncharacterized protein.
  
    0.825
RPS28
Ribosomal protein S28.
  
    0.810
RPL23
Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.809
RPL35
Ribosomal protein L35.
   
    0.808
RPS3
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
    0.798
RPL26
Ribosomal protein L26.
   
    0.795
RPS4X
Ribosomal protein S4 X-linked.
   
    0.780
PFDN1
Prefoldin subunit 1.
   
    0.752
RPS24
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
    0.737
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.