STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP6NLUSP6 N-terminal like. (764 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
   
 0.618
RAB43
RAB43, member RAS oncogene family.
    
 0.617
KIF16B
Kinesin family member 16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.599
AGMO
Alkylglycerol monooxygenase; Belongs to the sterol desaturase family.
    
 
 0.590
RAB19
RAB19, member RAS oncogene family.
    
 0.589
CAMK4
Calcium/calmodulin dependent protein kinase IV.
      
 0.542
SGCZ
Sarcoglycan zeta.
      
 0.487
ENSAPLP00000019534
Uncharacterized protein.
      
 0.487
RFX3
Regulatory factor X3.
   
  
 0.480
RAB41
RAB41, member RAS oncogene family.
    
 0.454
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.