STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JPH1Junctophilin 1. (799 aa)    
Predicted Functional Partners:
MLF1
Myeloid leukemia factor 1.
   
  
 0.638
ATP6V1D
ATPase H+ transporting V1 subunit D.
      
 0.632
NDUFB4
NADH:ubiquinone oxidoreductase subunit B4.
      
 0.632
NDUFB10
NADH:ubiquinone oxidoreductase subunit B10.
      
 0.630
ENSAPLP00000024705
EHD_N domain-containing protein.
   
  
 0.608
RABGEF1
Uncharacterized protein.
    
 0.585
PLA1A
Phospholipase A1 member A.
    
 
 0.508
DNAJA1
DnaJ heat shock protein family (Hsp40) member A1.
    
 
 0.496
CRISPLD1
Cysteine rich secretory protein LCCL domain containing 1.
      
 0.482
SRP72
Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family.
      
 0.473
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.