STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHC1Polyhomeotic homolog 1. (993 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.975
CBX2
Chromobox 2.
    
 0.968
CBX4
Chromobox 4.
    
 0.958
BMI1
RING-type domain-containing protein.
    
 0.953
PCGF2
Polycomb group ring finger 2.
    
 0.953
RNF2
Ring finger protein 2.
    
 0.951
SCMH1
Scm polycomb group protein homolog 1.
    
0.908
CBX7
Chromobox 7.
    
 0.888
CBX6
Chromobox 6.
    
 0.785
PHC3
Polyhomeotic homolog 3.
    
0.705
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.